CVE-2022-42885: Open Babel uninitialized pointer dereference in GRO residue parser

CVE-2022-42885 · Severity: high · CVSS 7.8 · Published 2026-07-01

Open Babel, a widely used chemistry data conversion library, contains a memory safety flaw in its GRO file format parser. If a user or automated service processes a specially crafted chemistry file, it could lead to a program crash or potentially allow an attacker to execute unauthorized code. This affects researchers and organizations using Open Babel to handle untrusted molecular data files.

Technologies: openbabel (PyPI). Vendors: PyPI.

Quick answers

Is CVE-2022-42885 exploited in the wild?
No. Junglewise Threat Intelligence has no report of CVE-2022-42885 being exploited in the wild.
How severe is CVE-2022-42885?
High severity, with a CVSS score of 7.8, published 1 July 2026.
Which products and versions are affected?
openbabel (PyPI) < 3.2.0, ECOSYSTEM:introduced=0,fixed=3.2.0.
Is there a fix for CVE-2022-42885?
Yes. openbabel (PyPI): upgrade to 3.2.0 or later. Junglewise finds every place you run it, drafts the upgrade and applies it once you approve.
How is CVE-2022-42885 attacked?
It is attacked with local access, in a software library.
Am I affected by CVE-2022-42885?
Check whether you run openbabel (PyPI) at an affected version. Junglewise does that check for you around the clock: connect your code, cloud and domains, and it matches new vulnerabilities like this one against what you actually run and tells you when one reaches you.

How to fix

  • openbabel (PyPI): upgrade to 3.2.0 or later
    pip install "openbabel>=3.2.0"

Technical details

A memory-safety vulnerability (CWE-824) exists in Open Babel's GRO reader due to improper residue handling. A malformed record in a GRO file causes the parser to access a residue pointer that has not been initialized. Exploitation requires a victim to open a crafted GRO file using the 'obabel' CLI tool, the OBConversion API, or any of the supported language bindings (Python, Java, etc.). While primarily leading to a denial-of-service (crash), some reports suggest it could potentially lead to arbitrary code execution. The issue is fixed in version 3.2.0.

Affected products

  • Open Babel Open Babel <= 3.1.1

Identifiers

  • CVE-2022-42885
  • GHSA-mw5r-wq2m-397c
  • PYSEC-2026-2787

Timeline

  • 2026-05-26: patched: Version 3.2.0 released
  • 2026-07-01: advisory: GitHub Advisory published

References

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